BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB007E06SP1|AL425709
(779 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1611 1448 0.0
>3x_Contig1611
Length = 15286
Score = 1448 bits (723), Expect = 0.0
Identities = 759/779 (97%)
Strand = Plus / Plus
Query: 1 atgcctctaggtcaaacttctactccattgatcaacgataagtttaaagatgtgattgat 60
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1136 atgcctctaggtcaatcttctactccattgatcaacgataagtttaaagatgtgattgat 1195
Query: 61 tttgagaacatggatcccaacagcattgataaagaatgcaggaraattgcacaaggrtct 120
||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||
Sbjct: 1196 tttgagaacatggatcccaacagcattgataaagaatgcaggaaaattgcacaaggatct 1255
Query: 121 cctgtaaaaagaggagaaaaggatgtcacacctatgagagatatacacgadattttaaac 180
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1256 cctgtaaaaagaggagaaaaggatgtcacacctatgagagatatacacgaaattttaaac 1315
Query: 181 gacttagaaggtcctaagtkgcttccgccttcttcaccaatttgctcggraccagttgtt 240
||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||
Sbjct: 1316 gacttagaaggtcctaagttgcttccgccttcttcaccaatttgctcggaaccagttgtt 1375
Query: 241 atagacgatgaccctgtagaaaatcttccggagctggcatcagagagtatttcaaatcat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1376 atagacgatgaccctgtagaaaatcttccggagctggcatcagagagtatttcaaatcat 1435
Query: 301 aagcatactacaactaatggcatagaacgcacgttcacaatgtatcctcctcagatcaat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1436 aagcatactacaactaatggcatagaacgcacgttcacaatgtatcctcctcagatcaat 1495
Query: 361 atagatgacgacgaggatgaggacgattcgttaattgatattctcacacaaagattcaca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1496 atagatgacgacgaggatgaggacgattcgttaattgatattctcacacaaagattcaca 1555
Query: 421 aagccagtcatcacagaatgcratggagaatcagaggaatcagatgcttccttattagar 480
||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||
Sbjct: 1556 aagccagtcatcacagaatgcaatgaagaatcagaggaatcagatgcttccttattagaa 1615
Query: 481 cttcttgatgaggaaaagccagctacactccctcaacttcaagtgagagarattgarcgc 540
|||||||||||||||||||||||||||||||||||||||||||||||| | ||||| |||
Sbjct: 1616 cttcttgatgaggaaaagccagctacactccctcaacttcaagtgagaaaaattgaacgc 1675
Query: 541 attgaagttatgcttgagtcagaggatgaraatgtggaagactctgtaaaatcaaatgag 600
||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct: 1676 attgaagttatgcttgaatcagaggatgaaaatgtggaagactctgtaaaatcaaatgaa 1735
Query: 601 aatcaaaccgatcatctgcttaataacaragccgatgtggttgagaggtatgttaacttg 660
|||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||
Sbjct: 1736 aatcaaaccgatcatctgcttaataacaaagccgatgtggttgaaaggtatgttaacttg 1795
Query: 661 gctaaattcccattccctcaacgcggctgtcaaagactatgtatttttgaaatcaaggaa 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1796 gctaaattcccattccctcaacgcggctgtcaaagactatgtatttttgaaatcaaggaa 1855
Query: 721 atgaaatcaccagcgcaaatwattctcacatgcttcaatcaggatgctggaaaagttaa 779
|||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||
Sbjct: 1856 atgaaatcaccagcgcaaataattctcacatatttcaatcaggatgctggaaaagttaa 1914
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5166
Number of Sequences: 1807
Number of extensions: 5166
Number of successful extensions: 114
Number of sequences better than 1.0e-20: 1
length of query: 779
length of database: 10,358,551
effective HSP length: 16
effective length of query: 763
effective length of database: 10,329,639
effective search space: 7881514557
effective search space used: 7881514557
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.6 bits)